PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0019587.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 332aa    MW: 37137.2 Da    PI: 6.7245
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0019587.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.36e-16113161153
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                                s ++GVr++k  g+W+AeIrdp     +  r +lg++ taeeA +a++ +r k+
  Rmu_sc0019587.1_g000002.1 113 SPFRGVRQRK-YGKWAAEIRDPI----KgGRLWLGTYATAEEASQAYETMRCKF 161
                                679******9.7*********83....358********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MSRPSLNQRK HKSKQSSKRR EFHAHNEDSK VLTRKVRIMF NDPDATDSSS SSEDETMETA  60
QYEKKKSLKK SKRFVQEVIH SFFMHSGRAV GCEAPPETRT TRTSSGRKRF SSSPFRGVRQ  120
RKYGKWAAEI RDPIKGGRLW LGTYATAEEA SQAYETMRCK FDEILRATTT SISDKNNKDD  180
KSNSDHEHLF LLRKATPITA SNSGGNGLLS HKGSPVAVLD LGKNADSDKE NIGTNNVGQL  240
RIPLDLSFLD EALQSLPTDQ QQQDVFNFVP DNEELDKLAS SIASSSLEEL GKYFDGMYCS  300
IDDIKIGGVD DDNPTNLPDC DDFADILIVQ SN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-16ERF family protein