PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0019189.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 257aa MW: 28116.6 Da PI: 5.7556 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.3 | 4.6e-19 | 43 | 92 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + r +r +lg+f+t eAa a++aa++kl+g Rmu_sc0019189.1_g000002.1 43 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAAMAYDAAARKLYG 92 69****999.**********8...3.35************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MLKSGIGSSV GVGERKTVKK PAQASSRKGC MRGKGGPENA TCTYKGVRQR TWGKWVAEIR 60 EPNRGARLWL GTFDTSHEAA MAYDAAARKL YGSEAKLNLP DQLVPHSPQP PVQNNNLQMA 120 QMQMANTSSG AACFPTVTGV LNNDVSVPVV LQDNTNSTYP VLIPFPNPSM QTCYGNTYEE 180 NNSNTTMSMD TKEEKNEGIY QGFWENVNTK VLPVFDDSIW AEAAMSIDFP VIENHGIFAS 240 NFVDGNPWEA LPASWCA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 1e-49 | ERF family protein |