PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0019012.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 417aa MW: 46518.6 Da PI: 4.8934

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0019012.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.1	4e-33	219	273	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt+eLHe+Fveav+qLGGse+AtPk il++mkv++Lt++hvkSHLQkYR+ Rmu_sc0019012.1_g000004.1 219 KARMRWTQELHEAFVEAVNQLGGSERATPKGILNVMKVESLTIYHVKSHLQKYRT 273 68****************************************************8 PP
2	Myb_DNA-binding	53.2	6.8e-17	221	272	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k I + m + +t +++ks++qky+ Rmu_sc0019012.1_g000004.1 221 RMRWTQELHEAFVEAVNQLGGSeraTPKGILNVMKvESLTIYHVKSHLQKYR 272 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MSSAFPHLPA PLDVNYSRLP DSFQVSAQRE KPMHSMLPQS SSLGNSFPSS SRLPCDSQIS 60 SVCPHERHSQ ISPINKLPSG ESLSLTHSQL QSTPVASYPE QNKDISWCPD SIQEFLHFSE 120 NLPDQNGLVD TSTGVIMSDD HAEKTDWSDL YPLISFDGPL DPYWELSIDD VSAVDPKPEV 180 LKHSSDIPVQ QPDIQQHQPV QSGEIFTSPD PVSTAPSTKA RMRWTQELHE AFVEAVNQLG 240 GSERATPKGI LNVMKVESLT IYHVKSHLQK YRTARYKPES SEGTCEKIPT PVEEMNSIDL 300 KTSGMGITEA LRLQVELQKQ LHEQLESQRK LQLEIEEQSK YLEKMFEQQR KMEDNRVKPT 360 SSTSDEHNKI GTSTPVDEGS QDASMKQKAQ ESETHENHDP PGDADSGAVP TKRARTG

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MSSAFPHLPA PLDVNYSRLP DSFQVSAQRE KPMHSMLPQS SSLGNSFPSS SRLPCDSQIS  60
SVCPHERHSQ ISPINKLPSG ESLSLTHSQL QSTPVASYPE QNKDISWCPD SIQEFLHFSE  120
NLPDQNGLVD TSTGVIMSDD HAEKTDWSDL YPLISFDGPL DPYWELSIDD VSAVDPKPEV  180
LKHSSDIPVQ QPDIQQHQPV QSGEIFTSPD PVSTAPSTKA RMRWTQELHE AFVEAVNQLG  240
GSERATPKGI LNVMKVESLT IYHVKSHLQK YRTARYKPES SEGTCEKIPT PVEEMNSIDL  300
KTSGMGITEA LRLQVELQKQ LHEQLESQRK LQLEIEEQSK YLEKMFEQQR KMEDNRVKPT  360
SSTSDEHNKI GTSTPVDEGS QDASMKQKAQ ESETHENHDP PGDADSGAVP TKRARTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	2e-69	G2-like family protein