PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0018542.1_g000001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 231aa    MW: 25250.1 Da    PI: 5.1777
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0018542.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.1e-2095146156
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                s+y+GVr+++  g+W+AeIrdp+    r  r++lg+f taeeAa+a++ a+ +++ge
  Rmu_sc0018542.1_g000001.1  95 SKYRGVRQRP-GGKWAAEIRDPR----RaVRVWLGTFQTAEEAARAYDTAAIEFRGE 146
                                89********.9*********82....48*************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MPSHSGGLPK EQEHAIIVQA LKQVVRGGTT QPPPPQLHYA SSSLPPTGGT DQVVIPFSDC  60
DTCQVCNMKM DDCLGCGLFR PSEQDEGKGK KMKTSKYRGV RQRPGGKWAA EIRDPRRAVR  120
VWLGTFQTAE EAARAYDTAA IEFRGERAKL NFPLSSEAGT TTTTGAALTR QSMETGEVNQ  180
VTASSVKSAN QEEGQSSDVK DEDIDRFIWE MLKNDDGDED LSTRVNSNLL N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.14e-27ERF family protein