PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0018017.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 325aa    MW: 35103.8 Da    PI: 6.3472
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0018017.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.6e-182474256
                        AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                               ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a++ l+g+
  Rmu_sc0018017.1_g000002.1 24 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARTLRGA 74
                               689******.7*********....4456*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MASVRAQNDG VRGRRKSSSR GHHRFVGVRQ RPSGRWVAEI KDSLQKVRLW LGTFDTAEDA  60
ARAYDDAART LRGANARTNF ELPQSNGAGG GDSGMENVEP FSFEDVCGNG AEEDGLLGAL  120
KAKLLDGKGF SRVQEKIDSS PLVVPRGGGF GFANPPNQEG SYIAGSSKEK KFSHTRCIQP  180
PSHKNDHMTG HDVVFHISDQ TEVAVSGHVA SNSGMVWTNE PPAYEVTWSN TLPMPTWPVP  240
TDQSIVSMSY TDQCSMELPT TSRDHGKVTA IGVTQQLSQI EGAMGGGAWS ADQQYMHCDN  300
NWAAAANGTW ESQGLYYQPS VSGVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-17ERF family protein