PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0016898.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 122aa MW: 13928 Da PI: 9.116 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67.9 | 2.6e-21 | 34 | 118 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 fYn+YAke+ Fs+ ++s ++k+n++ +++++vC+k+g+++ e +k +r + gCka++ v ++k +g++ ++ +++ Rmu_sc0016898.1_g000001.1 34 FYNRYAKEAVFSIISHSSATNKDNTQLMRKEYVCYKQGTSKVEGEK-----CKRGLPKLGCKARIAVVRKKeSGRYAISVFVEG 112 ***************************************9998877.....999***********9888777************ PP FAR1 85 HnHela 90 HnH+l+ Rmu_sc0016898.1_g000001.1 113 HNHPLT 118 ****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
MELEDDHVYI PQVKAELMPK LHQEFETIDD VAAFYNRYAK EAVFSIISHS SATNKDNTQL 60 MRKEYVCYKQ GTSKVEGEKC KRGLPKLGCK ARIAVVRKKE SGRYAISVFV EGHNHPLTSP 120 PR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-13 | FAR1 family protein |