PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0016640.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 265aa    MW: 29702.6 Da    PI: 4.8694
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0016640.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.4e-18123173255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                 y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g
  Rmu_sc0016640.1_g000010.1 123 SYRGVRRRP-WGKFAAEIRDSTR---HgVRVWLGTFDSAEAAALAYDQAAFAMRG 173
                                69*******.**********422...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MGYWDNNHIM SSHSITNTFQ TENSNISDFQ MNYSIFHSPN SDTSSEFSWD ALEFGNTSLP  60
FNENDSEEML LFGMLSKATQ ETTSFETETH NSAASSNPIK EEEVSSDSTS EEENPKTPKK  120
EKSYRGVRRR PWGKFAAEIR DSTRHGVRVW LGTFDSAEAA ALAYDQAAFA MRGSAAVLNF  180
PVERVRESLR DMNCATSDLD GGCSPVVALK RKHSMRRKLG NKKSRMERDV RLENVVVFED  240
LGADYLEQLL SSSESTSTTT AAANW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-61ERF family protein