PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0014846.1_g000002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GeBP
Protein Properties Length: 422aa    MW: 46394.1 Da    PI: 4.6318
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0014846.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573116.81.2e-36179272497
                     DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqk 87 
                                 rlw e+Dei++L+G+idfkak+g +ps+++ af+ef+k+s++++vsk+ql++K rrLKkK++++ +k ++g+ p+fsk+h+ k
  Rmu_sc0014846.1_g000002.1 179 GRLWGEDDEIAILKGMIDFKAKKGIDPSSNMGAFHEFLKRSLKADVSKNQLMDKTRRLKKKYHTNAEKGENGEGPVFSKAHELK 262
                                69********************************************************************************** PP

                     DUF573  88 ifelskkiWg 97 
                                +f+lskkiWg
  Rmu_sc0014846.1_g000002.1 263 SFDLSKKIWG 272
                                *********8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MAPKRLLQDP PAASSMEEDS DAETLDEEQE EEEEEEEQND AVQEKSDEEE EEEEEEEDDN  60
EEEENVNAKK PVVIPSSSVV PNPQSESASS EDDDAAAGSE TESDDINHSP SASDFTVKPI  120
VSKPVNDSSS AKPTKKPAPA PAKPAPGSKR PAESDPTPKD SRKKKKGANG GDDEDTKKGR  180
LWGEDDEIAI LKGMIDFKAK KGIDPSSNMG AFHEFLKRSL KADVSKNQLM DKTRRLKKKY  240
HTNAEKGENG EGPVFSKAHE LKSFDLSKKI WGAEANGGDD SAKNSRKKPR KSAKANNNNN  300
SSTVLALPVS DAAAERSVEK KVKVEEMNVA NGGVKAAESD DFWSKYPSLS DSLQLANCSS  360
RWEGLERVMI QKMPSIGSSK AKELDDRWRK LQVLEMELSV KKLDLMHEQA KLLLDGIKSR  420
KD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1287323KKPRKSAKANNNNNSSTVLALPVSDAAAERSVEKKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.17e-26GeBP family protein