PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0013090.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 286aa    MW: 31958.5 Da    PI: 5.8675
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0013090.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.7e-18145196256
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ t eeAa a+++a+ +++g+
  Rmu_sc0013090.1_g000004.1 145 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETSEEAAVAYDRAAYRMRGA 196
                                7********.***********9987..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MTELNGLHDH FLPHPNLIID PLTEQWGDLP FMFDDFDDML VYDSLWTAFS SDLSTPSMED  60
LTTAVKPEPA YNYFDELHQI LQPQESSILH DQVSINISAP NELSSPETES TVSQTSYDQL  120
QEEVPTPKVQ KVLGGGTSSV SRGRHYRGVR QRPWGKFAAE IRDPAKNGAR VWLGTYETSE  180
EAAVAYDRAA YRMRGAKALL NFPHRIGLNE PPPVRVTGKR KDPDQQAGNS PTSTTTRTPN  240
LNKRTKASLA SPAPDMGADA KFERDDRTRV NVNRTRHNSN VGLLVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.12e-43ERF family protein