PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0013090.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 285aa    MW: 31170.8 Da    PI: 8.4638
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0013090.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79.3e-21116166255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +y+GVr+++ +g+++AeIrdp+++g   r++lg+f+ta eAaka++ a+ kl+g
  Rmu_sc0013090.1_g000003.1 116 HYRGVRRRP-WGKYAAEIRDPNKRG--SRVWLGTFDTAVEAAKAYDLAAFKLRG 166
                                7********.**********96655..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MISQHLLSEF NSMESFITSL NNCTSNIDQT PQYQQADDSF KVSDYLLPSE PEFEFETKPQ  60
IVHSEPSPKK NSTLSHRKPT INVAIPTRPA PAVAPAVSAS ATAAQSSINS ENEARHYRGV  120
RRRPWGKYAA EIRDPNKRGS RVWLGTFDTA VEAAKAYDLA AFKLRGSKAI LNFPLEINSN  180
IAAAQPLQAS VVGRKRRRSE SAEGNSEGVE SNKAMKKEEE TISSGNSTSP IRSSISSAAA  240
VNCPLTPSNW TSIWDSKDLD GIFSVPPLSP LSPHPCFGYN QLLIH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1194198RKRRR
2194199RKRRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-50ERF family protein