PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0012710.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 302aa MW: 34565.4 Da PI: 9.0503

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0012710.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.7	1.1e-19	7	90	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHn 86 fYn+YAke+GFs+r ++s +s ++++ +r++v +k+g ++ e +k r+r ++gCka++ v ++k +g++ ++ +++ Hn Rmu_sc0012710.1_g000001.1 7 FYNRYAKEAGFSIRSHSSVTS-KDKKQLMREYVYYKQGDSKVEGEK-----RKRGLPKVGCKARIAVVRKKeSGRYAISVFVEAHN 86 *************999999.55558999*****9998877.....999*******9888777********** PP FAR1 87 Hela 90 H+l+ Rmu_sc0012710.1_g000001.1 87 HPLT 90 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MIYVAAFYNR YAKEAGFSIR SHSSVTSKDK KQLMREYVYY KQGDSKVEGE KRKRGLPKVG 60 CKARIAVVRK KESGRYAISV FVEAHNHPLT SPPRVHLLRS HHCVSEVNTV LSQQLSLVNV 120 EKHKQFEFFG VQAGGIQNIG FIQRDLYNYG RTCREEKKGR DGDLLYMHFE NEKEKDSSFV 180 YTMDGDEENR VIRCFWADSI SRRAYSFYGD VVIFDTTCNT NRYGMIFPPF TGVNNYGQAI 240 IFACAFLNDE TANTFVSLFK EFLNAMPGDA QENAPKMIIT DQDLAMTKAI AVGTFLINFM 300 RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-50	FAR1 family protein