PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0012378.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 282aa MW: 31935.7 Da PI: 4.6412 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.1 | 4e-13 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G ++W+ +++ g+ R++k+c++rw +yl Rmu_sc0012378.1_g000001.1 14 RGPWTIEEDHKLMNFILNNGIHCWRVVPKLAGLLRCGKSCRLRWINYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.9 | 8.8e-17 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+ E++++++++ lG++ W++Ia++++ gRt++++k++w++ Rmu_sc0012378.1_g000001.1 67 RGAFTETEEDQIIQLHSCLGNR-WSKIASHFP-GRTDNEIKNHWNT 110 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence |
MGRQPCCDKV GLKRGPWTIE EDHKLMNFIL NNGIHCWRVV PKLAGLLRCG KSCRLRWINY 60 LRPDLKRGAF TETEEDQIIQ LHSCLGNRWS KIASHFPGRT DNEIKNHWNT RIKKRLKLLG 120 VDSVSNKAID PKESMEDNKE IVTDISTELG QDNGLEPKLL QDDDNGNKGF EELSNEVELS 180 AFDETADVLE NYEMFCGSLD LGTFMLNQGV SNSSTISSNN TSATTTTTNS SISVEESNYN 240 PSISIGDRSL LQQNCLQQWV ESVDSMLSWD GFNNLEQDLF FF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 1e-81 | MYB family protein |