PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0011792.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 282aa    MW: 31458.1 Da    PI: 8.3165
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0011792.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-183282155
                        AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               s++ GVr+++ +g+WvAeI+d      k+ r +lg+f taeeAa+a+++a+  l+g
  Rmu_sc0011792.1_g000007.1 32 SKFVGVRQRP-SGKWVAEIKDtT----KKIRMWLGTFATAEEAARAYDEAACLLRG 82
                               79********.7*********33....36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MGLQSQKHEK RVLAEKESKF KQRSSSNNNT KSKFVGVRQR PSGKWVAEIK DTTKKIRMWL  60
GTFATAEEAA RAYDEAACLL RGSNTRTNFT SSHVPSNSPL SLKIKNLLNH KKTLKQQSPS  120
TPNTIKTTPK ASTRISSTIT DNNIHSSSYY NANCSSLPSF KSQSIEVSGD AYRPDLSNCI  180
GDLQVPAMFH LDQPWQFLSG FDQLPHNHEG LYLTKGIDTG VSRSAAEPNQ PTEFEHAEVE  240
RQITSASFYA MNEVNEYLEN AYDDASDALW DLPSLSQLFC LG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-50ERF family protein