PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0011720.1_g000009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 221aa MW: 25304.6 Da PI: 7.6282 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89 | 2.5e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g+lKKAeELSvLCda++a+iifsstgkl+ey+s Rmu_sc0011720.1_g000009.1 9 KKIDNATARQVTFSKRRRGLLKKAEELSVLCDADIALIIFSSTGKLFEYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 51.4 | 4.8e-18 | 91 | 173 | 18 | 100 |
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++a+L kei +++R++ Ge+L+ L+l+eLqqLe+ Le++l ++ +kK e ++++i elqk +l een++Lr++++e Rmu_sc0011720.1_g000009.1 91 NSNYARLSKEIAAKSHQLRQMRGEELHGLKLEELQQLENSLESGLGRVIEKKGEKIMKEITELQKNAVQLIEENERLRQQVME 173 56899***************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MAREKIQIKK IDNATARQVT FSKRRRGLLK KAEELSVLCD ADIALIIFSS TGKLFEYASS 60 SMKEILERHR LHSKNLDKLE QPSLELQLVE NSNYARLSKE IAAKSHQLRQ MRGEELHGLK 120 LEELQQLENS LESGLGRVIE KKGEKIMKEI TELQKNAVQL IEENERLRQQ VMERTDGRRR 180 HADSENRITE EGQSSESVTN LCNSNNAPQD YDSSDTSLKL G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 4e-87 | MIKC_MADS family protein |