PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0011709.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 1467aa MW: 166640 Da PI: 6.9099

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0011709.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	61.6	1.5e-19	1248	1306	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg +WrKYGqK++ +s++pr Y+rCt++ gC+++k+v++ + ++ ++tY g+H+++ Rmu_sc0011709.1_g000006.1 1248 DDGQAWRKYGQKMILNSRHPRCYFRCTHKydqGCNATKHVQQLQ--DTMYKTTYYGNHTCR 1306 8*************************99999******9..6899******995 PP

Sequence ? help Back to Top
Protein Sequence Length: 1467 aa Download sequence
MAASSSLSSG GRWNYDVFLS FRGQDTRKIF VGHLHKALDL KAINAFIDSE DLCKGNDLSE 60 LLRAIEDSRL SIVVFSQHYA SSTWCLKELV KILECVAVKK QLVVPIFYEV DPSDIRKLKG 120 SFAEAFAKHE QDSNPDMEEV NRWKIALTEA SNLSGWDSRN YADDAKFIEK IVEDISEKLV 180 HISSNKVNDL VGMDSHVEKM CSLLCLGEDD VRVVGVCGMP GIGKTTIARA VYDEIVCQFE 240 HYCFLENVKD GFKNNGAIQM QEELLSRIFE KRVRCLGTLS KGSKMIMERL SKKKVLLVLD 300 DVENFAQIEA LLGNQHSFGG GSRIIVTTRD IQSLSGVDAR YSPMFLSDDE ALELFMQYAF 360 RTNQPSREYD PLSRRAIEYA HGLPLALKVL GAFLDNKSIC EWKDELEKIK EIPHVEIQGV 420 LKKSFDGLDP SQKDIFLDIA CFFRGMDKGY VTKILESCGF YPHSGLRVLI DRALVTISDD 480 NRLEMHDLIK DMGWEIIRQQ SIKEPGKRSR LWVYEDVARV LTQNMATDAV ECIMLDLSKS 540 KDVYIDAEAF VRMTKLRLLR IGYNHSTDLN AKDFQSNQLD HPRGECKQHV SGDVKFLSHD 600 LRYLMWYGCP LKSLPSNFHP KNLVDLDMRC SHIEQLWEEI KPFKKLKFIN LSHSHYLTTT 660 PNFTEATNVE TLVLEGCSSL LDVNSTISAL KNLVFLCLRG CKELKSLPSS ICLKSLKTLD 720 LSGCSSLVKF PEISGIMEDL SEIYLNDTAI EELPSSIERL QGLVLLHLRN CRSLVHLPDN 780 ICKLVYLKDL TISGCSKLYH LPENLGNLES LICLEVEGSG IRELPVSILC LKRLKTLSCD 840 GCREMTMPFS SWSSSIEEYN CRYSGLLHLD LSDSNLWELS DGIAQLSSLK TLELRGTNLE 900 SLPATMNQLR CLTRLELEAC KRLKSVPELP STINYIDAHD CSALETVAKP NTRCSMNLCF 960 TFSNCLQLVQ TNLFRDIVET HSHYQGNYQR PLSLNMSLPG SEIPDWFNYQ CRGSSLTVQL 1020 PPNWFDDKFL GFAICAVSDF KGSQNDASDL SALCHCGLKG NHGESSFSFT LLDWGFTTDR 1080 ILEADHMFLA YVPWSEYRFT EEGKLVNERY FTEATFEIVV ENRVDRHVFG TVMNRHCITS 1140 CGVRFFHSNY MEEHNVSITE TKSHHDSCDI LSVSRTGKEG AGVQLEESLA LVMLPGVEAF 1200 SRWEWPQKVD RSSASESKKR PGLKDQSNSY KRRKNSESWT VVSPELTDDG QAWRKYGQKM 1260 ILNSRHPRCY FRCTHKYDQG CNATKHVQQL QDTMYKTTYY GNHTCRDIIK GPQLIMGASE 1320 SRKYWWIPNH QTTVSSEAGR NKVKEFESGD HRLRGLCLVF KFKSRIHNDK GSLWPLSSID 1380 PSLNIIKSSS LRSESIPGVP SSAVASCDKP IQVGAFVQGA VPRMLKLLQG RLYVIEKTLY 1440 NYLLNPKKEK DLLQFRPRET RAIICFR

Sequence ? help Back to Top

Protein Sequence Length: 1467 aa Download sequence

MAASSSLSSG GRWNYDVFLS FRGQDTRKIF VGHLHKALDL KAINAFIDSE DLCKGNDLSE  60
LLRAIEDSRL SIVVFSQHYA SSTWCLKELV KILECVAVKK QLVVPIFYEV DPSDIRKLKG  120
SFAEAFAKHE QDSNPDMEEV NRWKIALTEA SNLSGWDSRN YADDAKFIEK IVEDISEKLV  180
HISSNKVNDL VGMDSHVEKM CSLLCLGEDD VRVVGVCGMP GIGKTTIARA VYDEIVCQFE  240
HYCFLENVKD GFKNNGAIQM QEELLSRIFE KRVRCLGTLS KGSKMIMERL SKKKVLLVLD  300
DVENFAQIEA LLGNQHSFGG GSRIIVTTRD IQSLSGVDAR YSPMFLSDDE ALELFMQYAF  360
RTNQPSREYD PLSRRAIEYA HGLPLALKVL GAFLDNKSIC EWKDELEKIK EIPHVEIQGV  420
LKKSFDGLDP SQKDIFLDIA CFFRGMDKGY VTKILESCGF YPHSGLRVLI DRALVTISDD  480
NRLEMHDLIK DMGWEIIRQQ SIKEPGKRSR LWVYEDVARV LTQNMATDAV ECIMLDLSKS  540
KDVYIDAEAF VRMTKLRLLR IGYNHSTDLN AKDFQSNQLD HPRGECKQHV SGDVKFLSHD  600
LRYLMWYGCP LKSLPSNFHP KNLVDLDMRC SHIEQLWEEI KPFKKLKFIN LSHSHYLTTT  660
PNFTEATNVE TLVLEGCSSL LDVNSTISAL KNLVFLCLRG CKELKSLPSS ICLKSLKTLD  720
LSGCSSLVKF PEISGIMEDL SEIYLNDTAI EELPSSIERL QGLVLLHLRN CRSLVHLPDN  780
ICKLVYLKDL TISGCSKLYH LPENLGNLES LICLEVEGSG IRELPVSILC LKRLKTLSCD  840
GCREMTMPFS SWSSSIEEYN CRYSGLLHLD LSDSNLWELS DGIAQLSSLK TLELRGTNLE  900
SLPATMNQLR CLTRLELEAC KRLKSVPELP STINYIDAHD CSALETVAKP NTRCSMNLCF  960
TFSNCLQLVQ TNLFRDIVET HSHYQGNYQR PLSLNMSLPG SEIPDWFNYQ CRGSSLTVQL  1020
PPNWFDDKFL GFAICAVSDF KGSQNDASDL SALCHCGLKG NHGESSFSFT LLDWGFTTDR  1080
ILEADHMFLA YVPWSEYRFT EEGKLVNERY FTEATFEIVV ENRVDRHVFG TVMNRHCITS  1140
CGVRFFHSNY MEEHNVSITE TKSHHDSCDI LSVSRTGKEG AGVQLEESLA LVMLPGVEAF  1200
SRWEWPQKVD RSSASESKKR PGLKDQSNSY KRRKNSESWT VVSPELTDDG QAWRKYGQKM  1260
ILNSRHPRCY FRCTHKYDQG CNATKHVQQL QDTMYKTTYY GNHTCRDIIK GPQLIMGASE  1320
SRKYWWIPNH QTTVSSEAGR NKVKEFESGD HRLRGLCLVF KFKSRIHNDK GSLWPLSSID  1380
PSLNIIKSSS LRSESIPGVP SSAVASCDKP IQVGAFVQGA VPRMLKLLQG RLYVIEKTLY  1440
NYLLNPKKEK DLLQFRPRET RAIICFR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1218	1234	KKRPGLKDQSNSYKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12020.1	1e-113	WRKY family protein