PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0011709.1_g000003.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 1371aa    MW: 155401 Da    PI: 6.0227
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0011709.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.31.3e-2212271287158
                                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                       WRKY    1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58  
                                 ldDg  WrKYGqKe+ gs++pr+Y+rCt +   gC+++k+v+  ++ pk  eitY+g+H++
  Rmu_sc0011709.1_g000003.1 1227 LDDGQVWRKYGQKEILGSPYPRAYFRCTRKydqGCQATKRVQLVQDTPKEYEITYKGNHTC 1287
                                 58**************************998899*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1371 aa     Download sequence    
MAASSSPSSG GGWNYDVFLN FRGEDTRKIF VGHLHKALDL EAINAFIDSE DLRKGNDLSE  60
LLTAIEDSRL SIVVFSQNYA SSKWCLKELV KILECMSTKK HLVVPIFYEV DPSDIRKVNG  120
RFAEAFAKHE HDSNADMEEV HMWKSALTEA TNLSGWDSRN YKDDAKLIEK IVEDISKKLV  180
HIRSNKVSNL VGMDSHIAKM SSLLDLGEDD VRVVGVYGMP GIGKTTIARA IYDELVCLFD  240
HYCFLENVKE GFKHNGAIHM QEELLSRIFE KSVRSLGTLS RGSKMIMDRL SKKKVLLVLD  300
DVENFNQIEE LLGKQHSFGS GSRIIVTTRD IQSLSGVNER YSPMFLSDGE ALELFWQYAF  360
RTNQPTREYD PLSRRAVEYA QGLPLALKVL GASLDGKSIR EWEDELEKIK EIPHKEIQGV  420
LRTSFDGLDP SQQEIFLDIA CFFRGMDEGY VIKILENCGF YPHSGLQVLR DRALLTISYG  480
NRLEMHDLIQ DMGWQIVRQQ SIKEPGKRSR LWTYEDVDRV LAQNTATEAV EGIMLDLSKS  540
KDVDIDAEAF VRMTNLRLLL IGYNHYIDFN AKDFPLELLH QPRDECKQHV SGVVKFLSRD  600
LRYLMWHGCP LKSLPSNFGP KNLVDLDMRF SHIEQLWEGI KPFKKLKFIN LSHSHYLTTT  660
PDFTEATNVE TLVLDGCSSL LDVNSSISAL KNLVFLCLRG CKELENLPSS IFLKSLKILD  720
LSGCSNLVKF PEISGIMEDL SEIFLNETAI EELPSSIERL QGLVLLHLRN CRSLVRLPDN  780
ICNLVRLKDL TLSGCSKLYH LPENLGNLES LMYLEVEGSG IRELPFSILC LKRLKALSCD  840
GCKEMTMPFS SWSSSIEEYN CRYSGLLHLD LSDSNLWELS DGIAHLSALK TLELRRTNLE  900
RLPATMNQLR RLTRLELEAC KRLKSIPELP SSINYIDAHD CRALETVAKP NTRCSMNLCF  960
IFSNCLQLVQ TNLFRDIVET HSHHQGDYRL LLSFNMSLPG SEIPDWFNFQ CRGSSFTVQL  1020
PPNWFDNKFL GFAICAVGDI KGSQNDASDL SALCHCSLKG NHGQYSFSST LLDWGFTTDR  1080
ILKSDHMFMA YVPWSEYRFI EEGKLVNERY FTEATFEIVV ENRVDRHGFG TVINRHCITS  1140
CGVRFFHGDY MEEQILTISE TKSHNDSCDI LSVSRKGKEG VGVRLEESPA EGSSAGESKK  1200
RPGSEGQKGS NKRRKSPESW TVVSNTLDDG QVWRKYGQKE ILGSPYPRAY FRCTRKYDQG  1260
CQATKRVQLV QDTPKEYEIT YKGNHTCVNM TMIMGASDPA TWPTPVCSKK EHGDLSSSLS  1320
LIPFVPEKKE DCKEGTTASG LVGNVNDTSD MWTDFESPEF VFPDLGIEQS P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
111991215KKRPGSEGQKGSNKRRK
212121239KRRKSPESWTVVSNTLDDGQVWRKYGQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12020.11e-115WRKY family protein