PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0011702.1_g000003.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ZF-HD
Protein Properties Length: 274aa    MW: 29558.5 Da    PI: 7.1191
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0011702.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer96.62e-3064118358
                ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                                ++rY+eClkNhA+ +Ggha+DGCgEf+++ g+egt +alkCaAC+CHRnFHRre +
  Rmu_sc0011702.1_g000003.1  64 ACRYRECLKNHAVGIGGHALDGCGEFLAA-GAEGTLDALKCAACNCHRNFHRREAD 118
                                79**************************9.999********************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MEFEDQEEHD EEMEMEPSYD SLVNNNGGGG GVGGRVRMAS SAAEAAASAA AQLQQQQQQQ  60
TRRACRYREC LKNHAVGIGG HALDGCGEFL AAGAEGTLDA LKCAACNCHR NFHRREADEP  120
YGQLVPHQGH VSGHHSHHNG GFGHPQFSAS GAYYRTPGGY LHVTTQHRPL ALPSTSGGGG  180
TDQDDDMSNP SGGGGGGGSG FGMGMGTTSS KKRFRTKFSQ EQKERMLELA ERLGWRIQKQ  240
DEAAVQSFCD ETGVKRHVLK VWMHNNKHTL GKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.14e-58ZF-HD family protein