PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0011133.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 305aa MW: 33132.4 Da PI: 10.5208 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.5 | 8.5e-31 | 227 | 285 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D+++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+++dp+++++tYe eH+h+ Rmu_sc0011133.1_g000003.1 227 SDEFSWRKYGQKPIKGSPYPRGYYKCSSVrGCPARKHVERAQDDPTMLIVTYEAEHRHP 285 69*************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence |
MAIDLVRFSK IDDRTAMEEA ASAGLQSMEH LIRVLSSQTP SHNNLDCREI TDFTVAKFKQ 60 FISVLNRTGH ARFRRGPAKQ PSESTTTSSP PPPPPANPAP PKPQVTLSFE TGNPNTNTNT 120 ITHSKSKDCL TLSPPMSTTS SFLSSVTTGD GSVSNGKVFS SAAVPPAPAF SAGKPPLSQS 180 HRKRCHDELA TKTTSSGRCH CSKRRKSKVK RTVRVPAISS KIADIPSDEF SWRKYGQKPI 240 KGSPYPRGYY KCSSVRGCPA RKHVERAQDD PTMLIVTYEA EHRHPHPQQS NSVPAGAVGL 300 VFQSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 1e-51 | WRKY family protein |