PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Rmu_sc0011091.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 98aa MW: 11053.1 Da PI: 4.4538 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 36.2 | 1.9e-11 | 59 | 98 | 2 | 41 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkr 41 fYn+YA+++GFsvrk+ ++ks +n+ i +r+++Cs +gkr Rmu_sc0011091.1_g000001.1 59 FYNDYAHTIGFSVRKDVMQKSAKNEVISERQWCCSGKGKR 98 9***********************************9986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 98 aa Download sequence |
MEEHEQDDAN NSVLGEEDGN CNTEQGGGLH QFNGLSYIKL QNEDMIGKSF STLEEADIFY 60 NDYAHTIGFS VRKDVMQKSA KNEVISERQW CCSGKGKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G18960.1 | 6e-08 | FAR1 family protein |