PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0011079.1_g000009.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 325aa MW: 36817.7 Da PI: 7.7574

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0011079.1_g000009.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.6	1.3e-15	106	213	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkak 65 kfY+ Y++ +GFs+rk+++ + r++ ++ r++vCsk+gk++ + kk +++ r + +r+gC a Rmu_sc0011079.1_g000009.1 106 KFYHLYSRVIGFSTRKDRKVRAYRSE-FVIREWVCSKQGKATINAKKqglkekgktllqaekkkmkRNQCPRGKRYSRVGCMAG 188 6***************99996666.888999*****999999*******998766555556688999*** PP FAR1 66 lkvkkek.dgkwevtkleleHnHel 89 + ++ k ++k+ v+k+ ++HnH++ Rmu_sc0011079.1_g000009.1 189 FGIRYCKeRKKYFVSKFITNHNHDV 213 *999*************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MENNEGGVCY TDHLYHSSFP SDEEVSDDDG LLQIGEDEEG FFYDGGEKGL GHTSEIGNGK 60 CHLMDMETLD GTNVGGCVDL NGKDYSNLNM DDMKNVVFSS VCEAEKFYHL YSRVIGFSTR 120 KDRKVRAYRS EFVIREWVCS KQGKATINAK KQGLKEKGKT LLQAEKKKMK RNQCPRGKRY 180 SRVGCMAGFG IRYCKERKKY FVSKFITNHN HDVAVSEEVQ FLRSHRGVTD SVIAQVEALQ 240 KAQVHISRIY ENFGSMLVFS HSKNHSWVIN EKVSKFSCSI APKFLISNAD TDILLLSNGT 300 SGVEWLYPMV SNLTVQTLWE SITLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-14	FAR1 family protein