PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0010971.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 188aa MW: 21742.8 Da PI: 9.3373 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67.2 | 4.1e-21 | 46 | 138 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 +fYn+YAk +GF vr+++++ s + +g++t+ ++vCs +gkr+ee + +++ +++++etr +C + +kv+ ++ + + v+++ Rmu_sc0010971.1_g000001.1 46 SFYNAYAKAMGFGVRNDYKRLSiRITGRVTSLRLVCSAQGKRREEYMSnKKRVHKPKKETRFNCPCLFKVRYRSnINAYIVDDF 129 5******************999999*******************9988345556799****************9899******* PP FAR1 82 eleHnHela 90 ++H+H+la Rmu_sc0010971.1_g000001.1 130 ITNHSHQLA 138 *******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MDGSYESSMC NGSDCNEMQY KGVRYDKLST EDLKGQEFKI VEEAESFYNA YAKAMGFGVR 60 NDYKRLSIRI TGRVTSLRLV CSAQGKRREE YMSNKKRVHK PKKETRFNCP CLFKVRYRSN 120 INAYIVDDFI TNHSHQLAQA HDSHLLRSHR SVEDHHLALA TSMQKVSVVL HMNTLLIDQE 180 VLRMSGLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-14 | FAR1 family protein |