PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0010734.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 333aa    MW: 37079.7 Da    PI: 5.1256
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0010734.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.8e-182472355
                        AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               + GVr+++ +gr++AeIrdps+   + r++lg+f+ta+eAa a+++a+++++g
  Rmu_sc0010734.1_g000007.1 24 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAQEAALAYDRAALSMKG 72
                               56******.**********965...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MEKPLSQSGE RSRGRRKQAE PGRFLGVRRR PWGRYAAEIR DPSTKERHWL GTFDTAQEAA  60
LAYDRAALSM KGAQARTNFI YSDNSTFHSL LTPFDVQTLL PQQSLEFFTS TTTQTPRQQQ  120
PTNQNSPPGQ SSMFCQNERN PNIRSNNEKP SFDSLFFSND FSSDNSGYLG CIVPDNCLRP  180
PCDIPRSSDL TTTTHTLNID HQNFSFPNTA NSSIQTQPHC DQSSTATTFP LDVMNVPASI  240
MASSSNPGDQ LSCFEGFSHG FWGDNQQYSS WDQLNYRELS TMVDNNPLVT EDGCNIGALY  300
PIIENPSSSS FSCSPSVHPP IGDVVIDFGH SLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.14e-43ERF family protein