PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0010280.1_g000014.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 500aa    MW: 53882.3 Da    PI: 6.378
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0010280.1_g000014.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.58.5e-31253311259
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Rmu_sc0010280.1_g000014.1 253 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 311
                                699************************998****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    
MCSLSMPIGM ENYQGDLTDI LRAGAAAAAT GSSSSSAYHS ETMNSDSWQF SSDDNYSMKF  60
STSMAMEEVE DARDNFGDPF SSYIRDPLLH ELSSTSTGGF FSSPNSTPEM NISVDMEARA  120
GPFGAHVPGH HHQGEVTKRP CNNIFSRMLQ ISPGKLGGDV AGCDSVAVLG SPRGGGGGGG  180
GIKAGPGGVM VGSDMINANS SKGCLLENTG VGVQISSPRN PGIKRRKSQA KKVVCIPAPA  240
AANSRPTGEV VPSDLWAWRK YGQKPIKGSP YPRGYYRCSS SKGCSARKQV ERSRTDPNML  300
VITYTSEHNH PWPTQRNALA GSTRSQPSKA GAGSKISPNI AHQQKPDSPA KEEQKAAADS  360
MNENNHVLSP VIATVGSSST VKEEFEDIEK LQLELDHHDP HHQHDSDHHQ FSNHDQGFPY  420
RPSMPEQSNN QSEDFFADLG EIEADPLNLL FSQCFTADEQ QKGGNKAALD PFNLFDWSGD  480
QNTNTPNNNP SFGHEAKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.11e-84WRKY family protein