PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0010280.1_g000014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 500aa MW: 53882.3 Da PI: 6.378 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.5 | 8.5e-31 | 253 | 311 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ Rmu_sc0010280.1_g000014.1 253 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 311 699************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 500 aa Download sequence |
MCSLSMPIGM ENYQGDLTDI LRAGAAAAAT GSSSSSAYHS ETMNSDSWQF SSDDNYSMKF 60 STSMAMEEVE DARDNFGDPF SSYIRDPLLH ELSSTSTGGF FSSPNSTPEM NISVDMEARA 120 GPFGAHVPGH HHQGEVTKRP CNNIFSRMLQ ISPGKLGGDV AGCDSVAVLG SPRGGGGGGG 180 GIKAGPGGVM VGSDMINANS SKGCLLENTG VGVQISSPRN PGIKRRKSQA KKVVCIPAPA 240 AANSRPTGEV VPSDLWAWRK YGQKPIKGSP YPRGYYRCSS SKGCSARKQV ERSRTDPNML 300 VITYTSEHNH PWPTQRNALA GSTRSQPSKA GAGSKISPNI AHQQKPDSPA KEEQKAAADS 360 MNENNHVLSP VIATVGSSST VKEEFEDIEK LQLELDHHDP HHQHDSDHHQ FSNHDQGFPY 420 RPSMPEQSNN QSEDFFADLG EIEADPLNLL FSQCFTADEQ QKGGNKAALD PFNLFDWSGD 480 QNTNTPNNNP SFGHEAKRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30650.1 | 1e-84 | WRKY family protein |