PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0010172.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 289aa    MW: 32611.9 Da    PI: 9.6556
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0010172.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.45.3e-0984182178
                       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......................tekerrtraetrtg 61 
                                kfY++Y+  +GF  rk+++ +   +g i +r++ C+k+g r++++ +                        e + +++   +++
  Rmu_sc0010172.1_g000001.1  84 KFYSAYSLALGFGFRKDTKGEA--EGMICRRQWLCNKQGARAKKRFAmdgrgrtprritrlnsrlpsfvhIEMSTNQTWPMQIQ 165
                                6***************997776..999****************99888777777777777777777776655555566666777 PP

                       FAR1  62 Ckaklkvkkekdgkwev 78 
                                C+ ++ ++  +  +++v
  Rmu_sc0010172.1_g000001.1 166 CQSEVSIRPCHAYEYMV 182
                                77777777666666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
APDSVENGET NGAKEGNNHP SNGPADAKTN QPSLEPEGQP PVGLGRGLAA LDGKKQKSKA  60
KAASRLKVDD VKTMTFKTVK DVEKFYSAYS LALGFGFRKD TKGEAEGMIC RRQWLCNKQG  120
ARAKKRFAMD GRGRTPRRIT RLNSRLPSFV HIEMSTNQTW PMQIQCQSEV SIRPCHAYEY  180
MVEQAGGYEI VRFTMKDLYN KLDQQRRTTS FESDSEGALA YMTALAAQDT YFYCRFNVDV  240
ENRLANMFWR DGHAVVDFMR YGDVLIFDST NKTNVYKKPL VLFVGSNNH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-18FAR1 family protein