PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0009785.1_g000021.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ZF-HD | ||||||||
Protein Properties | Length: 392aa MW: 42843.5 Da PI: 7.3861 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 100.1 | 1.5e-31 | 142 | 197 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +++YkeClkNhAa++Gg+a+DGCgEfmps geegt++al+C+AC+CHRnFHR+e e Rmu_sc0009785.1_g000021.1 142 SIKYKECLKNHAAAMGGTATDGCGEFMPS-GEEGTIEALTCSACNCHRNFHRKEIEG 197 689*************************9.999********************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 392 aa Download sequence |
MELSSHQEGQ IPISIPIPIP IPINSSYGAG GHGHGHGHMI HHHHHHPPAA PHTHTLTHNN 60 HLITSSAAAV VAPPPPPPQN QIPASINNNG SSIPKTASLD QEEEEEEEED EEHVNHVNVA 120 YNNNNNNNNS GSNNNKKVVN SSIKYKECLK NHAAAMGGTA TDGCGEFMPS GEEGTIEALT 180 CSACNCHRNF HRKEIEGDHG MSSWDLNSNT RVGTGGRKVL LGHPNGHKNI SILAPDALGF 240 HTAANPTGGF LPSRTAPHHP HHHPHPHHMI MSYNNNMAIG GLMGSQLPSE SDEQEQDQIH 300 HHGHGGGVNV ASRAPVQLVK KRFRTKFTQE QKEKMFNFAE KVGWKIQKQE ESVVQNFCHE 360 IGVKRRVLKV WMHNNKHNLA KNKSQPSPST AA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14440.1 | 2e-63 | ZF-HD family protein |