PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0009650.1_g000010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 125aa MW: 14660.7 Da PI: 9.8198 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 87 | 2.9e-27 | 10 | 96 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 +fYn+YA+++GFsvrk k+++ +n + + +f+Cskeg++++++ + e+++ r trtgCka+++ ++ ++ w+v++++ eHn Rmu_sc0009650.1_g000010.1 10 EFYNSYATRIGFSVRKGKKRRDAKN-VVRQINFMCSKEGFEQDSDPS-ETKKADRLDTRTGCKAMIRFTLA-EDMWRVSHFHAEHN 92 6*****************9999555.5****************9999.999********************.9************* PP FAR1 87 Hela 90 H+la Rmu_sc0009650.1_g000010.1 93 HDLA 96 **97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence |
MVCSEVEAYE FYNSYATRIG FSVRKGKKRR DAKNVVRQIN FMCSKEGFEQ DSDPSETKKA 60 DRLDTRTGCK AMIRFTLAED MWRVSHFHAE HNHDLAKPEE RPFLRSNRKM SEAHKGVIKT 120 MRDLV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 24 | 31 | RKGKKRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 8e-17 | FAR1 family protein |