PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0009449.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 262aa    MW: 28398.3 Da    PI: 4.7147
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0009449.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-1881131155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                + y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  Rmu_sc0009449.1_g000010.1  81 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFSTAEMAARAHDVAALSIKG 131
                                68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MAPEPNNSEA ESTTSNSSLC SVASSPCLSG LLQSTTHSNS PSNTTKNPKT SQKGDSNSEQ  60
QQKSLKRGRE SRDDNNSSKH PVYRGVRMRN WGKWVSEIRE PRKKSRIWLG TFSTAEMAAR  120
AHDVAALSIK GNSAILNFPE LAELLPRPES LKPPDIQAAA AKAAAMVHLS STITTSSSST  180
SSSSSSSEGL ESEEDLGEIV ELPNIEDSFN SGEPGSEFIL VNDSVDIAWL YDHPPLLGLD  240
HNLIPSITFE EDLVSWDIQM IT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-52ERF family protein