PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0008921.1_g000017.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 541aa MW: 60117.4 Da PI: 5.6845

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0008921.1_g000017.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27	1.5e-08	287	327	51	91
FAR1 51 errtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 + +r++ r gCk +l++k+++dgk + tk+e eH+H+l+p Rmu_sc0008921.1_g000017.1 287 PEMKREQRRFGCKVMLQIKLNEDGKLVFTKFEAEHTHDLVP 327 55689999******************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MENLGSSQGE EGYKHSGGSG FFFIRFSFLR RGYFFEDQRH RIFGWWISHP SPVVERCGTV 60 DAGVWCGSRL DGVLVQAEGT PGGGRGRLEG GRGGAPGDGF RLGSRFVAGS GSLAGLGNGR 120 FDLGAGVGSG FGIRDGTGSG SWFVVGIRAW LVYGLGLTEC IVIGTQAYTT KFMENKDDES 180 CYQHCSNTEN EQRGCGDDAI DGETNKEPEY DTQEASSDTE VPSDDEDVDS SLEGLCILDG 240 KKQAGGENIP VLGMSFESDQ DAYDYYNSYA RVVGFSVRRI LYKKNTPEMK REQRRFGCKV 300 MLQIKLNEDG KLVFTKFEAE HTHDLVPESS SHVLRSQRTI EPSRGGLMNQ MHFAGFKPSQ 360 IFSYQTVEAG RPENLNFLQT DCNNFIQRRR AKFLKKGDAQ CLLDYFKEKQ MEDRTFFYAI 420 RTNIDNEICG CFFVMENQGH RFSVVAAVEG GAVGCFRTRS VLQSLTLVGL QVELGELRAA 480 SLIDPWWLFG SIHVKLGSTQ IGLLFTAFEI VFNPLCSFSD LFWPEAVRHY LWRRSSGVPA 540 T

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MENLGSSQGE EGYKHSGGSG FFFIRFSFLR RGYFFEDQRH RIFGWWISHP SPVVERCGTV  60
DAGVWCGSRL DGVLVQAEGT PGGGRGRLEG GRGGAPGDGF RLGSRFVAGS GSLAGLGNGR  120
FDLGAGVGSG FGIRDGTGSG SWFVVGIRAW LVYGLGLTEC IVIGTQAYTT KFMENKDDES  180
CYQHCSNTEN EQRGCGDDAI DGETNKEPEY DTQEASSDTE VPSDDEDVDS SLEGLCILDG  240
KKQAGGENIP VLGMSFESDQ DAYDYYNSYA RVVGFSVRRI LYKKNTPEMK REQRRFGCKV  300
MLQIKLNEDG KLVFTKFEAE HTHDLVPESS SHVLRSQRTI EPSRGGLMNQ MHFAGFKPSQ  360
IFSYQTVEAG RPENLNFLQT DCNNFIQRRR AKFLKKGDAQ CLLDYFKEKQ MEDRTFFYAI  420
RTNIDNEICG CFFVMENQGH RFSVVAAVEG GAVGCFRTRS VLQSLTLVGL QVELGELRAA  480
SLIDPWWLFG SIHVKLGSTQ IGLLFTAFEI VFNPLCSFSD LFWPEAVRHY LWRRSSGVPA  540
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-24	FAR1 family protein