PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008612.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 236aa    MW: 26490.8 Da    PI: 6.9001
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008612.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.1e-204897255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                               +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae+Aa a+++a++k++g
  Rmu_sc0008612.1_g000008.1 48 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEDAAIAYDNAALKFKG 97
                               7********.**********94....45************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MSAMVSALTQ VIGNPEEDNK VQSNPSVKDE PDRSQPVQDQ ESTVRKRHYR GVRQRPWGKW  60
AAEIRDPKKA ARVWLGTFET AEDAAIAYDN AALKFKGTKA KLNFPERVQG NSSFLMQGSS  120
GTTSSGSSVS TERNLGRPAA TVPHHVAPLV AASQQQQESS SFPDLYQYAQ LLQSNDIDFS  180
SNYQYTSNPL NHPQFSTPQF PPSTYYPSHQ QQGQQDDHVQ EDQHDNKNWN RRNPSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.12e-40ERF family protein