PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0008339.1_g000020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 256aa MW: 28917.2 Da PI: 4.751 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.2 | 1.8e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++l+ +++ +G g+W++ +++ g+ R++k+c++rw +yl Rmu_sc0008339.1_g000020.1 14 KGPWTTEEDQILISYIQNYGHGNWRALPKHAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.9 | 1.7e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l Rmu_sc0008339.1_g000020.1 67 RGNFTREEEDAIINLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MVRAPCCEKM GLKKGPWTTE EDQILISYIQ NYGHGNWRAL PKHAGLLRCG KSCRLRWINY 60 LRPDIKRGNF TREEEDAIIN LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLLKHN 120 NTTSPTCSTS NLTSRYAEPE GVNFESPTSH ASMSPQPSSS DDFSSVTEAS AATGQNMIKD 180 EKIELDASFL EIDDSFWSEA LSADNSGDNQ LEFLEGTNDQ AELQLLLPSN IDDGMDFWYD 240 LFIKAGYGDT PELPEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 2e-82 | MYB family protein |