PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0008192.1_g000020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 189aa MW: 20016.1 Da PI: 5.9239 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56 | 9.7e-18 | 23 | 72 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+Wv+eIr+p+ + r++lg+f t+e+Aa a++ a+++l+g Rmu_sc0008192.1_g000020.1 23 TYRGVRRRS-SGKWVSEIREPK----KpNRIWLGTFSTPEMAAVAYDVAALALKG 72 69****888.8*********94....468***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MQYTTNSSES SSSSSTGPGR HPTYRGVRRR SSGKWVSEIR EPKKPNRIWL GTFSTPEMAA 60 VAYDVAALAL KGQDAELNFP NSASSLPVPA SNSSRDIQAA ATSAAAAIGA AAAAMGVGNG 120 ATSTRSSTES GHGHVLNDHE FIDEDLIFDM PNVLRNMAEG MLLSPPRLDI AGDHDAFAAE 180 EHGNLWKFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 1e-46 | ERF family protein |