PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008149.1_g000011.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 476aa    MW: 52122.9 Da    PI: 7.3008
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008149.1_g000011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.12e-29114171260
                                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                                +DgynWrKYGqK v+g+ + rsYYrCt+++Cpvk++vers+ ++++++++Y g+H+h+k
  Rmu_sc0008149.1_g000011.1 114 EDGYNWRKYGQKLVRGNIYVRSYYRCTHPKCPVKRQVERSH-NGQLIDTVYFGQHDHPK 171
                                8****************************************.***************85 PP
2WRKY103.21.5e-32283341159
                                ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                ++Dgy+WrKYGqK vkg+++prsYYrC+ +gCpvkk+ver+ +d kvv+ tYeg+H+h+
  Rmu_sc0008149.1_g000011.1 283 VNDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVKKHVERAFNDSKVVIATYEGQHDHD 341
                                58********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    
MVSLGKDVTD EVASDNVPKK ENIDTEIHVS PHQTPTNGVC PLKSDDKGSA PSKVPNKALQ  60
VPDGGITALQ SNQEGSVSSL TSEKALLTPE TGALVLQSGH EGSTSSRVRE RPLEDGYNWR  120
KYGQKLVRGN IYVRSYYRCT HPKCPVKRQV ERSHNGQLID TVYFGQHDHP KPQLSVPIAV  180
GFAVSVGEER AEQRLLTSGE DKPLEAHGDT PKQTEPVDPL QHSNVAENEA VQGVLSLSNR  240
TRDGDPDPKR QKKEKHNGNS IPVDKPTGEP RVVVQTMSEV DIVNDGYRWR KYGQKLVKGN  300
PNPRSYYRCS NPGCPVKKHV ERAFNDSKVV IATYEGQHDH DVPPLRTVTP NTAASNVLPA  360
AHNGDSGTKV EAHAVSRASV ACTSPEHEGK PIEQPDFESK TKSRRIDAAA SDMVVDSDLG  420
PERKINEELI GKARVHEEGD SHDTIVCRAN KLQNGKSESI PSEQEKRKPK AEPVQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.23e-88WRKY family protein