PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0007974.1_g000005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 244aa MW: 27398.5 Da PI: 4.345 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 28.8 | 4e-09 | 102 | 138 | 54 | 90 |
FAR1 54 traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +ra tr g ka ++v+k+++g+++v+kle+ HnHel+ Rmu_sc0007974.1_g000005.1 102 PRAITREGFKALMTVRKRENGRYYVAKLEKSHNHELV 138 6899*******************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MQVWTEHYVM EVEVSSEEVV DSYVSLEDEG YEHCVVEDVE VRVVLDDVKE DNGDIDLVQY 60 MAGGDNGGII EPTLDMEFDS EDDARNFYNA YAKHIGFSIR GPRAITREGF KALMTVRKRE 120 NGRYYVAKLE KSHNHELVTP AMRHFLTSHK QECDPNQSSS NSFSSPGMSL DAPMNVLSDC 180 SSFGKMAFAV QSNASYIGRG RLSTFGIDAQ SLLGFFKIMQ ASDLAFYYAV QVDEEDRLST 240 VFLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 5e-20 | FAR1 family protein |