PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0007739.1_g000022.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 612aa MW: 68967.7 Da PI: 7.6049

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0007739.1_g000022.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	31	8.2e-10	45	125	8	88
FAR1 8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 + GF++ + +s++ k n+ + t+ C ++gk +++++k+ k+rr++ + +++C kl+ kk + d+ we++ ++ HnH+ Rmu_sc0007739.1_g000022.1 45 RLNGFKIITFRSENGKGNK-RARITLACERSGKYDRRTSKKGKNRRPQGTIKCDCPFKLQGKKLEtDDDWELKVVKGIHNHS 125 5679999999988886665.899************99989999999999999999999988888*************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 612 aa Download sequence
MQSEIVIGSS NVEFTCGKDY TSEFTTTRIF KSRDDLVEWA CEVGRLNGFK IITFRSENGK 60 GNKRARITLA CERSGKYDRR TSKKGKNRRP QGTIKCDCPF KLQGKKLETD DDWELKVVKG 120 IHNHSAWYSN ADLLFSSRFP SDGKSRENDE LKDDIQQPME ILVILQEDND PSAPPLPEIV 180 SDGKSRGKDE LKDDIQQLWR FYRRIMTLLL HPCLRLWNLH NAVLLVYHIP LKFIGACPAV 240 LRPYILDIKD VVSDGHCGFR AIASLLGNND EDGWSSLLCA NQAIKKHPGK ESLQEAQLFQ 300 KRIRVSSTTD DLSRELLHAL PNIAHSSNNN DSKKVPMYVM LPLDTVTHGV HLNKPRAMNA 360 SSMALKNAGV EGVMVDAWWG LVEKDGPSKF NFWHHCNTDC VATAAPVFRF SATPSGGGGG 420 ASPTLIQYKR TRYDDSLCAE NKKVPIDSAP SLAATSPESF QLKTPMSYAS SVLQPLGTRL 480 SNAMMEEFTL DDSDFTITEG KLGPNISFSE CVEAKLDLEW NCAVIVKLMG RPNSDDAYEF 540 MRRALTRKWT LKGRWQLVDL PNSFFTVKFQ LCEDMNYAFC NGPWIMTGQT LVVQKWRPEF 600 DPSEEQIKTM AV

Sequence ? help Back to Top

Protein Sequence Length: 612 aa Download sequence

MQSEIVIGSS NVEFTCGKDY TSEFTTTRIF KSRDDLVEWA CEVGRLNGFK IITFRSENGK  60
GNKRARITLA CERSGKYDRR TSKKGKNRRP QGTIKCDCPF KLQGKKLETD DDWELKVVKG  120
IHNHSAWYSN ADLLFSSRFP SDGKSRENDE LKDDIQQPME ILVILQEDND PSAPPLPEIV  180
SDGKSRGKDE LKDDIQQLWR FYRRIMTLLL HPCLRLWNLH NAVLLVYHIP LKFIGACPAV  240
LRPYILDIKD VVSDGHCGFR AIASLLGNND EDGWSSLLCA NQAIKKHPGK ESLQEAQLFQ  300
KRIRVSSTTD DLSRELLHAL PNIAHSSNNN DSKKVPMYVM LPLDTVTHGV HLNKPRAMNA  360
SSMALKNAGV EGVMVDAWWG LVEKDGPSKF NFWHHCNTDC VATAAPVFRF SATPSGGGGG  420
ASPTLIQYKR TRYDDSLCAE NKKVPIDSAP SLAATSPESF QLKTPMSYAS SVLQPLGTRL  480
SNAMMEEFTL DDSDFTITEG KLGPNISFSE CVEAKLDLEW NCAVIVKLMG RPNSDDAYEF  540
MRRALTRKWT LKGRWQLVDL PNSFFTVKFQ LCEDMNYAFC NGPWIMTGQT LVVQKWRPEF  600
DPSEEQIKTM AV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	4e-08	BES1 family protein