PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0007696.1_g000013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 109aa MW: 12183.6 Da PI: 4.9663 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.1 | 2e-08 | 7 | 55 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 WT eE + + a + + W++Ia+ ++ g++ q+k +++++l Rmu_sc0007696.1_g000013.1 7 QWTREENKAFEVALAANWNCiekgEWEKIASSIP-GKSIDQIKAHFRQLL 55 7*****************99**************.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 109 aa Download sequence |
MAGTSDQWTR EENKAFEVAL AANWNCIEKG EWEKIASSIP GKSIDQIKAH FRQLLDDVAA 60 IEDDQVPFPS YADEDYPIKE VRSGVQDGKD FGGEPKAVKR QAKSVKKTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 1e-16 | MYB family protein |