PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0007631.1_g000005.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 569aa MW: 62882.8 Da PI: 6.3497

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0007631.1_g000005.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	78.7	6.5e-25	222	278	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk + +rsYYrCt+++C+vkk +e+++ ++++ei+Y+++H+h+ Rmu_sc0007631.1_g000005.1 222 SDGYNWRKYGQKQVKCPPGSRSYYRCTFSECSVKK-IECCDISGHITEIVYKSQHTHD 278 7******************************98.*******************7 PP
2	WRKY	97.5	8.7e-31	394	450	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ +++++v+itY+g H+h+ Rmu_sc0007631.1_g000005.1 394 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNTSAVIITYKGIHDHD 450 9*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MQKPPSFHHH LLVLRRDPDR SGHLPCKDIW EIGIGLDRFV KHQSSDALKK NREEEEDEEF 60 EEEEDEDESD KEEENQSGIP SVELQSSGAE SRDARFETLA VPQLTEKDQC AGFGVNSATN 120 DGAQFQEPIG ISHQEVLAAA PNQPARGQIQ NLQQLSTYPT SLSELSPTSV TQSISPAPSP 180 ILPEQRPSLQ KVNGLCTPEE DKQISSDFKS ISPVPLVKTS ASDGYNWRKY GQKQVKCPPG 240 SRSYYRCTFS ECSVKKIECC DISGHITEIV YKSQHTHDPP RRSNCTREIK VASSAECVGN 300 SVIEYPCEIL NDSELPTTSK EPIQENPIPE RKRQNSNDSD GNGDVMIKEE HINEPESKRR 360 LKKSNSEYSD SLLKPGKKPK FVVHAAGDVG ISGDGYRWRK YGQKMVKGNP HPRNYYRCTS 420 AGCPVRKHIE TAVDNTSAVI ITYKGIHDHD MPVPKKRHGP PSAPLVAAAA PASMNNLQIV 480 KTDTEGHQSS TQWSVDKGAH QSSTQRLVDK GAHQSSTQRS VDKGAHQSST QWSVDKGGEL 540 TGETLELGGE KAMESARTLL SIGFEIKPC

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MQKPPSFHHH LLVLRRDPDR SGHLPCKDIW EIGIGLDRFV KHQSSDALKK NREEEEDEEF  60
EEEEDEDESD KEEENQSGIP SVELQSSGAE SRDARFETLA VPQLTEKDQC AGFGVNSATN  120
DGAQFQEPIG ISHQEVLAAA PNQPARGQIQ NLQQLSTYPT SLSELSPTSV TQSISPAPSP  180
ILPEQRPSLQ KVNGLCTPEE DKQISSDFKS ISPVPLVKTS ASDGYNWRKY GQKQVKCPPG  240
SRSYYRCTFS ECSVKKIECC DISGHITEIV YKSQHTHDPP RRSNCTREIK VASSAECVGN  300
SVIEYPCEIL NDSELPTTSK EPIQENPIPE RKRQNSNDSD GNGDVMIKEE HINEPESKRR  360
LKKSNSEYSD SLLKPGKKPK FVVHAAGDVG ISGDGYRWRK YGQKMVKGNP HPRNYYRCTS  420
AGCPVRKHIE TAVDNTSAVI ITYKGIHDHD MPVPKKRHGP PSAPLVAAAA PASMNNLQIV  480
KTDTEGHQSS TQWSVDKGAH QSSTQRLVDK GAHQSSTQRS VDKGAHQSST QWSVDKGGEL  540
TGETLELGGE KAMESARTLL SIGFEIKPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-113	WRKY family protein