PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0007586.1_g000004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 765aa MW: 87065.4 Da PI: 6.5107 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 99.6 | 3.3e-31 | 83 | 170 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 fYn+YA++vGFs+r+s ++s+r+g+i++r+ vCs+eg+r++ ++ +++r+r+ tr+gCka+++vkk+++g+w v+kl++eH Rmu_sc0007586.1_g000004.1 83 FYNSYARRVGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRDGGEN--RSKRQRTITRVGCKAQMTVKKQSSGRWAVSKLVKEH 164 9*****************************************9988..999********************************* PP FAR1 86 nHelap 91 nH+l+p Rmu_sc0007586.1_g000004.1 165 NHDLVP 170 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 765 aa Download sequence |
MDYKPLTIGN DVVEFDLGGS GEDDTIALDL EHPDDGYDLF EEDDLVRLAS SSTRFGDDLG 60 NGDPNLEPYE GMEFDSEQAS RIFYNSYARR VGFSTRVSVY QRSRRDGSII CRQIVCSREG 120 FRRDGGENRS KRQRTITRVG CKAQMTVKKQ SSGRWAVSKL VKEHNHDLVP PDKVHCLRSH 180 RHVSGPARSL IDTLQAAGMG PSGVMSVLIK ESGGINNVGF TKVDCQNYMS SSRQRTLGSG 240 GQLVFDYLKR MQDEDPGFFC AVQGDFENST GNIFWADSNS RMNYSYFGDT VTFDTTYRTN 300 RYRVPFAPFT GWNHHGQPVL FGCALLLNES ESSFVWLFQT WLAAMSGCQP VSITTDQDRI 360 IRAAVVQVFP GTRHRFCKWN VFREAQEKLS HIYQSHPTFE AEFLRCINMT ETIDEFEICW 420 ESLLKMYDLD SNEWLQSMYH ARQQWVPVFL RDTFFGEMFV TQGSDNINSY FDGYINASTN 480 IQVLIKQYEK AIATRHEKEV KADYDTLNIS PILRTPSPME KQAAKLYTRI IFMKFQEELV 540 ETLAYPATVV DDTGSETMFR VAKFGEDHKG HFVKFNVFEK KASCSCQMFE ISGIICRHIL 600 AVFRVTNVLT LPSHYILKRW TRNAKSGVLL DEHALGLPND SQDSSAARYD NLRREAIKYV 660 EEGAESECVY NVAMDALREA ANKVAAAKKH GPGVVQHTPK NCSQQLVSCT VDQDKKIEEL 720 AAELEIAIQR CEAYQAKLLT ILKDMEEQKL KISVNVRNVR LNLKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 0.0 | FAR1 family protein |