PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0007525.1_g000007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 224aa MW: 25783.6 Da PI: 5.6308 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.2 | 9.4e-14 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W + Ed++ +d+vk++G g W + +r+ g++R++k++++rw++yl Rmu_sc0007525.1_g000007.1 16 KGVWAASEDQIVKDYVKKHGVGKWGKLSRETGLKRCGKSVRLRWLNYL 63 789*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 28.9 | 2.7e-09 | 69 | 105 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E+el+++++k+lG++ ++ gRt++++k++w++ Rmu_sc0007525.1_g000007.1 69 RGNITEDEEELIIRLHKLLGNR--------IP-GRTDNEIKNYWNS 105 7999****************99........**.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MGESSTCYDK NEGPKKGVWA ASEDQIVKDY VKKHGVGKWG KLSRETGLKR CGKSVRLRWL 60 NYLRPGIVRG NITEDEEELI IRLHKLLGNR IPGRTDNEIK NYWNSRLKRK LQQQNHLEVP 120 EVPRNKEIRE DLSSSAAVAA AAEKNPHLTG NNVNEDEDYH QHHDVDFGVG IEFEATDNNN 180 GTGDDEHLRD DLWWNNFIMD LNDIQLDASE FQPDFPEIRL GNLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 2e-44 | MYB family protein |