PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007367.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 564aa    MW: 65027.4 Da    PI: 6.9521
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007367.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1552.8e-17110220190
                       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....................tekerrtraetrtgCka 64 
                                kfY+ Y++ +GFs+rk+k++ +k+++++++r++vCsk g++ + +k+                    +++  r +  +rt+C  
  Rmu_sc0007367.1_g000010.1 110 KFYKYYSHVAGFSTRKAKKYIHKTKKTVYRRQWVCSKAGRHVSVQKTkevggcgmkeapngdknkvsRKRLLRGTRISRTDCPG 193
                                6****************************************99999899************9876544444558899******* PP

                       FAR1  65 klkvkkek.dgkwevtkleleHnHela 90 
                                +++v  ++ ++ ++v+k++++HnH+la
  Rmu_sc0007367.1_g000010.1 194 QFMVMWSNhQDLFYVSKFVTQHNHDLA 220
                                9999888879**************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 564 aa     Download sequence    
MDSSEEEGLR FTDYNYHNQV FSDEEEDEPL GFESLSNYFG EVPVIETMPP NTATALEGEM  60
EMNRCNQFKK VVPNLGVEFG NVELNGRNFK DITYEDVKHL WFRTIDEAEK FYKYYSHVAG  120
FSTRKAKKYI HKTKKTVYRR QWVCSKAGRH VSVQKTKEVG GCGMKEAPNG DKNKVSRKRL  180
LRGTRISRTD CPGQFMVMWS NHQDLFYVSK FVTQHNHDLA IAPEVHFLRS HRNVEKHDIA  240
QVESLLQAQV SISRAYEFLA QQSGGYHNMR FTEKDLYNKL RPKNMKYDAE GDAETAVRRM  300
KAKGSTEKEF WFEGYSTASY LTFGMTASLW LIEDGAPAVC EFLWETEPPV FQQVEILGVH  360
KKLRFSGDWE RFHWENRLER RRCYVFTYMG QLRFSVLLFD TVRGSMCTTP VQFSEAPHMG  420
PHIRGIEQLQ GNVEPQEDHM DADGAQGEEM EEGINEADVE VDDAEPREET VAARWQRGRS  480
CKCTIQTCHG YLPAKFAQAT FPTGKAVKVK VQKSDGRVWR MKAVPSNTTH YLSAGYTRFR  540
EDLSLPIGSA IELHVVGRNI MVFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-14FAR1 family protein