PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007066.1_g000014.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ZF-HD
Protein Properties Length: 353aa    MW: 38173.9 Da    PI: 7.4875
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007066.1_g000014.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer111.83.5e-3564121359
                ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                                 v+YkeClkNhAaslGgha+DGCgEfmps++++ +++++lkCaACgCHRnFHRre+e+
  Rmu_sc0007066.1_g000014.1  64 VVTYKECLKNHAASLGGHALDGCGEFMPSPTATpTDPTSLKCAACGCHRNFHRREPED 121
                                589******************************9*********************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MDIAPSITTT TTTTTSTKSP EADSDTPTRI QPAKPISFSN GVLKRHHPAH HHHHNSSIPV  60
TPVVVTYKEC LKNHAASLGG HALDGCGEFM PSPTATPTDP TSLKCAACGC HRNFHRREPE  120
DNIPAVAPAT HVIEYQPHHR HHPPPPLIGN RSPNSASPPP ISSSYYPSAP HMLLALSTGI  180
SDNPNNHHGG QIVSPGGPNG RKRFRTKFSQ EQKDKMFQFA ERVGWKMQKR DEDIVHEFCN  240
EIGVDKGVLK VWMHNNKNTF AKRDGSGGAG NGINTTAAAR LPNSTLDQIH NNMNGNNNNT  300
SNEEDEDDDH PNNNNNNNGG GSLSNIPNPI HHHYQLGGDH PHGVTNGGSS SSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.12e-73ZF-HD family protein