PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0007063.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 394aa MW: 42987 Da PI: 6.5134

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0007063.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	108	4.5e-34	214	272	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++prsYYrCt+agC vkk+vers++dp++v++tYeg+H+h+ Rmu_sc0007063.1_g000001.1 214 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSIVVTTYEGQHTHP 272 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MDGRQELRNN TTTTNRTTLP PSSSSSSAPM ANSALFSDHE IPMIPNNTFP SLSSIFDSEP 60 ERGYLGFMEL LGNTDFAPVV DFGTQTTPSD SLVTMMMPPQ QQQQTQTQAQ ALALPSPVSS 120 TVPESGTNSE ALNSGANTAP TTPNSSSISS SSNEAHAANN NNEEQTTTKA GDEEEDADQD 180 PDKTQKQLKP KKKNQKRQRE PRFAFMTKSE VDNLDDGYRW RKYGQKAVKN SPYPRSYYRC 240 TTAGCGVKKR VERSSDDPSI VVTTYEGQHT HPSPITPRGS MGMAPLPSEL SGHLFTGAGS 300 GYGVAHHYQH QQQQQPHLHS YIYNSSPSLN ITTTTSSAPS YGFNQASFPG LFQERYNNTG 360 GGHSSNLAAS NLLRDHGLLQ DMLPSQIRKE TKEG

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MDGRQELRNN TTTTNRTTLP PSSSSSSAPM ANSALFSDHE IPMIPNNTFP SLSSIFDSEP  60
ERGYLGFMEL LGNTDFAPVV DFGTQTTPSD SLVTMMMPPQ QQQQTQTQAQ ALALPSPVSS  120
TVPESGTNSE ALNSGANTAP TTPNSSSISS SSNEAHAANN NNEEQTTTKA GDEEEDADQD  180
PDKTQKQLKP KKKNQKRQRE PRFAFMTKSE VDNLDDGYRW RKYGQKAVKN SPYPRSYYRC  240
TTAGCGVKKR VERSSDDPSI VVTTYEGQHT HPSPITPRGS MGMAPLPSEL SGHLFTGAGS  300
GYGVAHHYQH QQQQQPHLHS YIYNSSPSLN ITTTTSSAPS YGFNQASFPG LFQERYNNTG  360
GGHSSNLAAS NLLRDHGLLQ DMLPSQIRKE TKEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	7e-55	WRKY family protein