PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0006915.1_g000008.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 974aa MW: 108436 Da PI: 5.6272

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0006915.1_g000008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	74.1	1.8e-23	902	951	1	50
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvvei 50 ldDg++WrKYG+K+vk+s++pr+YY+C+ +gCpvkk+ver++edp ++ Rmu_sc0006915.1_g000008.1 902 LDDGFKWRKYGKKMVKNSPNPRNYYKCSCEGCPVKKRVERDKEDPARRKT 951 59******************************************976655 PP

Sequence ? help Back to Top
Protein Sequence Length: 974 aa Download sequence
MKPGKRSGGV GGGRSSFSDR RLNEFRTRLE SSTELDHRSS VDEIVDHLRG GYPDYERLKR 60 QVFRRFVSQT LASPSFKRSK PLPVMSGSSE EEEEELAGSK RRKRARNERE ERLQQIEEAH 120 VRKSRQSNGN VPSPSSSSSS SASEDEGDEE STSEDAIYGE ELEPKFDLMK SMLREAYTDP 180 KSGGKSKAAE QQKEKNVEMD IPGREKVKLV AGSRGPRPES VSNKAESEAK SSISRGVEVK 240 RNEGPKFSDL GGMQKVLEEL NKEVIRPLRR SWLPQWLGVR PMSGILLCGP PGCGKTTLAH 300 AIANETGIPF YKISATEVVS GVSGASEENI RDLFSKAYRT APSIVFIDEI DAIASKRENM 360 QREMEKRMVT QLMTCMDQSH RPVQAEDANS DSQSSDQASG YVLVIGATNR PDAVDPALRR 420 PGRFGREILL GVPDENSRLE ILSVLTRKLK LEGSFDLLKI ARSTPGYVGA DLAELADRAG 480 NIAMNRIFDE IDSTIEEGKE DFCRQPEEME KYAISMADFE EAVQVVQPSS KREGFSAIPN 540 VKWENVGGLD LLRKEFDRYI VRRIKHPENY EKFGVNSETG FLLYGPPGCG KTLIAKAVAN 600 EAGANFIYIK GPELLNKYVG ESELAVRTLF TRARTCSPCI LFFDEVDALT TRRGKEGGWV 660 VERLLNQLLI ELDGADQRRG VFVVGATNRP DVMDRAFLRP GRFGKLIYVA PPNTDERGLI 720 LKAIGRKYPV DASVDLGEIG KWKACENFSG ADLAALMDEA AMAALEEKET SAESSDASSW 780 TIKETHFQPA LAKIIPSLTE RFLSAKMSNN NFNRSVQTPE NDFSDQPNFD EYLMFGDWLE 840 EDPNYVASGS TQNSVNQVND DDSGGSSSQL GGSTTNEKGS VLERQQVQER VAFKMKSEVE 900 ILDDGFKWRK YGKKMVKNSP NPRNYYKCSC EGCPVKKRVE RDKEDPARRK TTAVAAATDV 960 AQPLKRSYDD QSWN

Sequence ? help Back to Top

Protein Sequence Length: 974 aa Download sequence

MKPGKRSGGV GGGRSSFSDR RLNEFRTRLE SSTELDHRSS VDEIVDHLRG GYPDYERLKR  60
QVFRRFVSQT LASPSFKRSK PLPVMSGSSE EEEEELAGSK RRKRARNERE ERLQQIEEAH  120
VRKSRQSNGN VPSPSSSSSS SASEDEGDEE STSEDAIYGE ELEPKFDLMK SMLREAYTDP  180
KSGGKSKAAE QQKEKNVEMD IPGREKVKLV AGSRGPRPES VSNKAESEAK SSISRGVEVK  240
RNEGPKFSDL GGMQKVLEEL NKEVIRPLRR SWLPQWLGVR PMSGILLCGP PGCGKTTLAH  300
AIANETGIPF YKISATEVVS GVSGASEENI RDLFSKAYRT APSIVFIDEI DAIASKRENM  360
QREMEKRMVT QLMTCMDQSH RPVQAEDANS DSQSSDQASG YVLVIGATNR PDAVDPALRR  420
PGRFGREILL GVPDENSRLE ILSVLTRKLK LEGSFDLLKI ARSTPGYVGA DLAELADRAG  480
NIAMNRIFDE IDSTIEEGKE DFCRQPEEME KYAISMADFE EAVQVVQPSS KREGFSAIPN  540
VKWENVGGLD LLRKEFDRYI VRRIKHPENY EKFGVNSETG FLLYGPPGCG KTLIAKAVAN  600
EAGANFIYIK GPELLNKYVG ESELAVRTLF TRARTCSPCI LFFDEVDALT TRRGKEGGWV  660
VERLLNQLLI ELDGADQRRG VFVVGATNRP DVMDRAFLRP GRFGKLIYVA PPNTDERGLI  720
LKAIGRKYPV DASVDLGEIG KWKACENFSG ADLAALMDEA AMAALEEKET SAESSDASSW  780
TIKETHFQPA LAKIIPSLTE RFLSAKMSNN NFNRSVQTPE NDFSDQPNFD EYLMFGDWLE  840
EDPNYVASGS TQNSVNQVND DDSGGSSSQL GGSTTNEKGS VLERQQVQER VAFKMKSEVE  900
ILDDGFKWRK YGKKMVKNSP NPRNYYKCSC EGCPVKKRVE RDKEDPARRK TTAVAAATDV  960
AQPLKRSYDD QSWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	3e-31	WRKY family protein