PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0006626.1_g000014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | bZIP | ||||||||
Protein Properties | Length: 256aa MW: 28461.9 Da PI: 7.271 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.8 | 1.3e-09 | 81 | 125 | 6 | 50 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 r rr NReA r++R++Kka ++ Lee+vk+L+ N++L +l+ Rmu_sc0006626.1_g000014.1 81 RRRRPSGNREAVRKYREKKKAHTAYLEEEVKKLQVLNQQLVRKLQ 125 5677777*********************************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MDDGELETLD HDVFPKPNSS GNFQTSTSVD TFRTCLHTHT CNQPGPDAAH THTCYHTHTQ 60 VLPSEENDGA KSKEHSVLKP RRRRPSGNRE AVRKYREKKK AHTAYLEEEV KKLQVLNQQL 120 VRKLQGKACL EAEFLRLRNL LLDFRGKVDS ELGAFPFQKQ SYKTSAIFKE GDCELQSTVG 180 ETVLRCQTDL PCHCPPAVGL SLQARTDASG ETMVSFGGNC QPPVIDCRKN PNGMASAEVE 240 NPHIAETLAS STTQDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35040.1 | 6e-37 | bZIP family protein |