PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006599.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 120aa    MW: 14180.7 Da    PI: 10.1152
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006599.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.47.3e-161295284
                       FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtklele 84
                               fY +YAk +GF+vrk+ +++s r++++t  ++vCs eg+r e+  + +++ r +++ tr++C + +kv+  k+++ +v+ ++++
  Rmu_sc0006599.1_g000001.1 12 FYYAYAKAMGFDVRKDDKRTSARTRRVTICKWVCSAEGERLEKYMDnNNNVRMPKKLTRCHCPCLFKVRYFKEKNSYVELISKQ 95
                               9***************************************99988745666779****************99888888877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MKFVTVEAAE TFYYAYAKAM GFDVRKDDKR TSARTRRVTI CKWVCSAEGE RLEKYMDNNN  60
NVRMPKKLTR CHCPCLFKVR YFKEKNSYVE LISKQIIHMI LHSHRSLIFL GHIGLSQILI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.14e-07FAR1 family protein