PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006572.1_g000001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 434aa    MW: 47636.8 Da    PI: 6.6266
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006572.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.64.2e-152576155
                        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Rmu_sc0006572.1_g000001.1 25 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 76
                               57****************988532...5************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MKPMTRQEYV ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ  60
EEAAEAYDIA AIKFRGLNAV TNFDMSRYDV KSILESSALP ITTGATAKRL KDVQQQQPPP  120
PADHHHQIML SSVLDHHGQV IRSSSSTEHD IMSNVYSAYG SYGAQQGCSW PTLAFNQAQA  180
QAAAAPHQAP FAAGINGMQL HYSPYGYGYG NAHAQRVWCK QEQDTNSNQE RSFHHQDDDH  240
LRQQLQLGGT HNFFHDHDQQ QQQQTSGLMG LMDSSAASME HSSGSNSVIY SGGDHHGNNN  300
GYGSSTTGTG GGYIMPMVMS TVVANDDQNQ ADGNNNNING FGDGDDQEAN IKAQQLGYDH  360
HPQNMFLGSS STIDPAYQHH ASNRNLYYHL PVQDDQHESS SVAVATSSTT CNMNWVPTAV  420
PTLAHPTFTV WNDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17430.13e-57AP2 family protein