PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0006475.1_g000009.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 478aa MW: 55394.9 Da PI: 8.6683

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0006475.1_g000009.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.1	7.1e-24	26	111	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 Yn+YA + GFsvrk + ++ + n+ i +r+f Cskeg++++e+ + +++++ etr+gCka++ + dg w v++++++H Rmu_sc0006475.1_g000009.1 26 LYNTYALRKGFSVRKGHIRRDTSNN-IRQREFLCSKEGFARDEDVF-QPNKHRKLETRVGCKAMILFAVK-DGIWTVSQINSDH 106 7**************99995555.*************999.99999***********999.********* PP FAR1 86 nHela 90 nHela Rmu_sc0006475.1_g000009.1 107 NHELA 111 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MEETIGDDEE LKVGMQVHSD DEAYNLYNTY ALRKGFSVRK GHIRRDTSNN IRQREFLCSK 60 EGFARDEDVF QPNKHRKLET RVGCKAMILF AVKDGIWTVS QINSDHNHEL AKPEERQFLR 120 SGRKIIDACG NIFTSMKDAG VRPTKSFFYI ANEVGGPENV GFTKKDVYNY LQRKKNEMLE 180 AGDAQSLLNH FKRKQESFVW LFESFLESMG NKELKTVFTD EDKAMANAVK IVFPNACHRL 240 CTWHIAKNAS KRIGSYLGNP EFKKQFNHCL HGCTTEIEFQ VSWDDLISRY NVGGNTWLAK 300 LYSLREKWCL AFSRDIFSAK IRSTQRSEST NNVFHQISTN TMELIEFFHH YEKKIEERRL 360 AELEDDYRCK NGAPRPKVWS KMLRSAAKVY TNKMFQLFES EFVGCMGVRL KKVSSLDKVH 420 IYEAIEDGRQ SVHKIEYNST SLSISCSCKS FESLGITTRE NSKSEEFHCD NPKFVAKT

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MEETIGDDEE LKVGMQVHSD DEAYNLYNTY ALRKGFSVRK GHIRRDTSNN IRQREFLCSK  60
EGFARDEDVF QPNKHRKLET RVGCKAMILF AVKDGIWTVS QINSDHNHEL AKPEERQFLR  120
SGRKIIDACG NIFTSMKDAG VRPTKSFFYI ANEVGGPENV GFTKKDVYNY LQRKKNEMLE  180
AGDAQSLLNH FKRKQESFVW LFESFLESMG NKELKTVFTD EDKAMANAVK IVFPNACHRL  240
CTWHIAKNAS KRIGSYLGNP EFKKQFNHCL HGCTTEIEFQ VSWDDLISRY NVGGNTWLAK  300
LYSLREKWCL AFSRDIFSAK IRSTQRSEST NNVFHQISTN TMELIEFFHH YEKKIEERRL  360
AELEDDYRCK NGAPRPKVWS KMLRSAAKVY TNKMFQLFES EFVGCMGVRL KKVSSLDKVH  420
IYEAIEDGRQ SVHKIEYNST SLSISCSCKS FESLGITTRE NSKSEEFHCD NPKFVAKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-39	FAR1 family protein