PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006452.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 272aa    MW: 29736 Da    PI: 4.5732
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006452.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-20119169255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +++GVr+++ +g+++AeIrdp++ng   r++lg++ tae+Aa a+++a+ k++g
  Rmu_sc0006452.1_g000003.1 119 HFRGVRRRP-WGKYAAEIRDPKKNG--SRVWLGTYETAEDAALAYDQAAFKMRG 169
                                69*******.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MFGEIDLESD FALLESIRQH LLDDNFDTTF DLEASSPTAS GSPPPIYCRS FSFGTLFSAE  60
NWSDLPLKVD SDSDDTVVSD AVPDEVTATP VKAEPQEVVE VLEESVAARE TQAPSSGRHF  120
RGVRRRPWGK YAAEIRDPKK NGSRVWLGTY ETAEDAALAY DQAAFKMRGS KAKLNFPHLI  180
GSEGSQPVRI TPKRRSPESY SSSSSSTSES CSPKPKRPNL GVGPAAAKAE FCGSIRVEMV  240
ETSQLAVVDQ RLNDFNTTVV SMPQEVMISG YE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-36ERF family protein