PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006080.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 305aa    MW: 34788.1 Da    PI: 4.9706
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006080.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.3e-31134191258
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                                +D ++WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers+++p++++itY+ eHnh
  Rmu_sc0006080.1_g000001.1 134 SDVWAWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSNSNPELFIITYTAEHNH 191
                                79*************************998**************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MENWDLQAVV RGCKNNLEGL THTMEFSQSS CFGFAPVTIE EDDEIFQAFP QLFEATTALD  60
ELEELYKPFY PILQPISPPT IPIASVSVPQ EVTAEEKEPK KLKSVKESSP MSKRSRKNQS  120
KRVVQEVQEK DLFSDVWAWR KYGQKPIKGS PYPRSYYRCS SSKGCSARKQ VERSNSNPEL  180
FIITYTAEHN HVHPTRRNSL AGSTRTKFPK SQKKEKSKNE FVPVKEEAQR LPEEDEVSHE  240
SVMDMMLGDE VVPGFEDFDQ KLEELSELMA EPVMADGFFS DQFPDNYFPS SWFLGHSTST  300
VTGAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.12e-38WRKY family protein