PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006028.1_g000028.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 384aa    MW: 42484.2 Da    PI: 5.3586
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006028.1_g000028.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.48.6e-0997141855
                        AP2   8 wdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                ++ ++++W +++      gk   ++++g+f+t+e+Aa+a++ a+ + +g
  Rmu_sc0006028.1_g000028.1  97 RNAQNKKWQVRLGK----GKDiDSIYVGTFDTEEQAAEAYDVAAIRVKG 141
                                5667899**88555....2347**********************98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MCKRSCDHWL HEVKNEILFG MSMNRDSFRF HSSESMDSNL YLQPDNPFQL PSSIRDAPHD  60
CNFTVANYPV PPPLPLGGYE GFITGANNST YGGKQTRNAQ NKKWQVRLGK GKDIDSIYVG  120
TFDTEEQAAE AYDVAAIRVK GPKAITNFDK SNYDVKQILE SPKFLINKGA SKTLKRSSVD  180
DVLQKRRKTR SDSSSTPSAP PSLHPIDQTQ PTVIDSSLQY QFPIPYLQVP VPHGYQNPIF  240
EANRSFSPQY DYGGSEPIAQ LQPIIPLLNQ EFPSHQYCNS NSQHHLDQTP SSQFLQDTQN  300
PNLVAGLNNL ASDSCMEEFS SSQVLEASSE MMGTNEGGAH GDGSSHVVGN LGDPVFGLGN  360
SDLDPASWLE TFLRMSPQCP NSMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.15e-23AP2 family protein