PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0005791.1_g000017.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 90aa MW: 9872.98 Da PI: 10.2242 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 74.9 | 2.4e-23 | 35 | 83 | 2 | 50 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieW 50 g+kd+hsk++T +g+RdR++Rl+a++a++f+d+qd+LG+d++sk ++W Rmu_sc0005791.1_g000017.1 35 SGQKDSHSKVSTTKGPRDRSIRLVAHTAIQFYDMQDQLGYDQPSKVVDW 83 689********************************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 90 aa Download sequence |
MAMINMGGGS HEGGTASSST TSEIVEAQGH ILRASGQKDS HSKVSTTKGP RDRSIRLVAH 60 TAIQFYDMQD QLGYDQPSKV VDWPRRTRRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31070.1 | 2e-28 | TCP family protein |